『Next Generation Systematics』

Peter D. Olson, Joseph Hughes, and James A. Cotton (eds.)

(2016年6月刊行, Cambridge University Press[Systematics Association Special Volume Series: 85], Cambridge, x+347 pp. with 8 color plates, ISBN:9781107028586 [hbk] → 版元ページ

【目次】
List of contributors ix


Introduction: studying diversity in an age of ubiquitous genomics [James A. Cotton and Peter D. Olson] 1

Part I. Next Generation Phylogenetics 11

1. Perspective: challenges in assembling the 'next generation' tree of life [Michael J. Sanderson] 13
2. The role of next generation sequencing technologies in shaping the future of insect molecular systematics [Joseph Hughes and Stuart Longhorn] 28
3. Phylogenetics of Nematoda [Mark Blaxter, Georgios Koutsovoulos, Martin Jones, Sujai Kumar and Ben Elsworth] 62
4. High throughput multiplexed mitogenomics for metazoans-prospects and limitations [Peter G. Foster, Maria Stalteri, Andrea Waeschenbach and D. Timothy J. Littlewood] 84
5. Investigating bacterial microevolution through next generation sequencing [Josephine M. Bryant and Simon R. Harris] 101

Part II. Next Generation Biodiversity Science 121

6. Perspective: après le déluge: ubiquitous field barcoding should drive twenty-first-century taxonomy [Richard M. Bateman] 123
7. Perspective: biodiversity and the (data) beast [Holly M. Bik and W. Kelley Thomas] 154
8. Next generation biodiversity analysis [Mehrdad Hajibabaei and Ian King] 175
9. Protist systematics, ecology and next generation sequencing [David Bass and Thomas Bell] 195

Part III. Next Generation Challenges and Questions 217

10. Perspective: systematics in the age of genomics [Antonis Rokas] 219
11. Perspective: the role of next generation sequencing for integrative approaches to evolutionary biology [Ralf J. Sommer] 229
12. Next generation apomorphy: the ubiquity of taxonomically restricted genes [Paul A. Nelson and Richard J. A. Buggs] 237
13. Utilizing next generation sequencing for evo-devo study of plant traits [Rachael H. Walker, Paula J. Rudall and Beverley J. Glover] 264
14. An NGS approach to archaeobotanical museum specimens as genetic resources in systematics research [Oliver Smith, Sarah A. Palmer, Rafal Gutaker and Robin G. Allaby] 282
15. From sequence reads to evolutionary inferences [James A. Cotton] 305


Index 336