『ReCombinatorics: The Algorithmics of Ancestral Recombination Graphs and Explicit Phylogenetic Networks』

Dan Gusfield
(2014年7月刊行, The MIT Press, Massachusetts, xx+580 pp., ISBN:9780262027526 [hbk] → 版元ページ

【目次】
Preface xi
Acknowledgments xix


1. Introduction 1
2. Trees First 35
3. A Deeper Introduction to Recombination and Networks 61
4. Exploiting Recombination 97
5. First Bounds 127
6. Fundamental Combinatorial Structure and Tools 177
7. First Uses of Fundamental Structure 197
8. Galled Trees 235
9. General ARG Construction Methods 285
10. The History and Forest Lower Bounds 361
11. Conditions to Guarantee a Fully Decomposed MinARG 381
12. Tree and ARG-Based Haplotyping 389
13. Tree and ARG-Based ssociation Mapping 433
14. Extensions and Connections 469


Appendix A: A Short Introductioon to Integer Linear Programming 523


Bibliography 533
Index 565